Removing Credits From Deleted Vendor Payments
It is important to understand that deleting a vendor bill payment or a customer payment does not automatically unapply credits that you have applied. If you need to delete a payment that includes bills or invoices with credits applied, you must open each credit and unapply it separately.
Vendor credits can be unapplied either before or after you delete a bill payment.
To unapply vendor credits:
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Go to Transactions > Payables > Enter Vendor Credits > List.
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Click Edit next to the credit you want to unapply.
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On the Bill Credit, click the Apply subtab.
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Clear the Apply box next to the bill it is applied to.
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Click Save.
After a vendor credit is unapplied, it can then be applied to another bill.