MySQL 5.7 Reference Manual Including MySQL NDB Cluster 7.5 and NDB Cluster 7.6
Information managed by the MySQL server is stored under a directory known as the data directory. The following list briefly describes the items typically found in the data directory, with cross references for additional information:
Data directory subdirectories. Each subdirectory of the data directory is a database directory and corresponds to a database managed by the server. All MySQL installations have certain standard databases:
              The mysql directory corresponds to the
              mysql system database, which contains
              information required by the MySQL server as it runs. See
              Section 5.3, “The mysql System Database”.
            
              The performance_schema directory
              corresponds to the Performance Schema, which provides
              information used to inspect the internal execution of the
              server at runtime. See
              Chapter 25, MySQL Performance Schema.
            
              The sys directory corresponds to the
              sys schema, which provides a set of
              objects to help interpret Performance Schema information
              more easily. See Chapter 26, MySQL sys Schema.
            
              The ndbinfo directory corresponds to
              the ndbinfo database that stores
              information specific to NDB Cluster (present only for
              installations built to include NDB Cluster). See
              Section 21.6.15, “ndbinfo: The NDB Cluster Information Database”.
            
Other subdirectories correspond to databases created by users or applications.
            INFORMATION_SCHEMA is a
            standard database, but its implementation uses no
            corresponding database directory.
          
Log files written by the server. See Section 5.4, “MySQL Server Logs”.
          InnoDB tablespace and log files. See
          Chapter 14, The InnoDB Storage Engine.
        
Default/autogenerated SSL and RSA certificate and key files. See Section 6.3.3, “Creating SSL and RSA Certificates and Keys”.
The server process ID file (while the server is running).
      Some items in the preceding list can be relocated elsewhere by
      reconfiguring the server. In addition, the
      --datadir option enables the
      location of the data directory itself to be changed. For a given
      MySQL installation, check the server configuration to determine
      whether items have been moved.